The Naked Templar bug is not merely a bug - Agent Smith has started to invade Agartha! But the bees are fighting back, they have limited his movements, his equipment (thats why he lost his suit) and are trying to stop him from taking over our characters! This is of course only possible because Agartha is a highly advanced computer, every time we enter Agartha we are de-materialized and transformed - we are entering the matrix of the hollow earth.
By leaving Agartha, our bees are able to access their last save of our original persona and are restoring us similar to the process of resurrection after death.
The developers have outdone themselves this time. We should have been clued in when they announced the new Agent system! Maybe this is the beginning of Season 2 - or a hint for things to come even later in the storyline.
Keep your eyes open! Agent Smith is among us now!
…this is my new pet-conspiracy-theory and I am sticking to it.